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UGP/PGM protein (Phaeodactylum tricornutum) - STRING interaction network
"UGP/PGM" - UDP-Glucose-Pyrophosphorylase/Phosphoglucomutase in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UGP/PGMUDP-Glucose-Pyrophosphorylase/Phosphoglucomutase (629 aa)    
Predicted Functional Partners:
GPI_3
Glucose-6-phosphate isomerase; Belongs to the GPI family (518 aa)
   
  0.971
GPI_2
Glucose-6-phosphate isomerase; Belongs to the GPI family (551 aa)
   
  0.971
TPI/GapC3
Triosephosphate isomerase/glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family (614 aa)
   
 
  0.957
Tkl
Transketolase (664 aa)
   
 
  0.945
Phatr15495
Glucokinase (235 aa)
       
  0.944
PGM_2
Phosphoglucomutase (528 aa)
   
  0.939
Phatr54493
Udp-n-acetylglucosamine diphosphorylase (600 aa)
     
 
  0.938
Phatr29260
Transketolase (684 aa)
   
 
  0.938
Phatr13382
Predicted protein (244 aa)
   
 
  0.935
Phatr10546
Predicted protein; Belongs to the carbohydrate kinase PfkB family (302 aa)
     
  0.925
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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