STRINGSTRING
Phatr50453 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr50453" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr50453Predicted protein (279 aa)    
Predicted Functional Partners:
Phatr19324
Predicted protein (554 aa)
 
 
  0.998
PHATR_3140
Predicted protein (196 aa)
   
 
  0.995
Phatrdraft1682
Anthranilate synthase (927 aa)
   
  0.868
Phatr17238
Anthranilate synthase (958 aa)
   
  0.868
Phatr10025
Predicted protein (295 aa)
   
 
  0.744
Phatr12888
Predicted protein (202 aa)
   
   
  0.743
Phatr12810
Predicted protein (202 aa)
   
   
  0.743
Phatr47067
Predicted protein (1237 aa)
   
   
  0.739
Phatr9654
Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine (347 aa)
   
   
  0.738
Phatr38891
Predicted protein (373 aa)
   
   
  0.729
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
Server load: low (15%) [HD]