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STRINGSTRING
DP2 protein (Phaeodactylum tricornutum) - STRING interaction network
"DP2" - E2f-dp in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DP2E2f-dp (182 aa)    
Predicted Functional Partners:
RBR
Predicted protein (1198 aa)
     
 
  0.922
E2F2
Predicted protein (753 aa)
     
 
  0.863
E2F1
Predicted protein (394 aa)
     
 
  0.863
DEL
Predicted protein (572 aa)
     
 
  0.769
Phatr42822
Predicted protein (837 aa)
     
 
  0.703
RPN7
Regulatory proteasome non-atpase subunit 7 (330 aa)
       
      0.590
PCNA
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (260 aa)
     
   
  0.485
dsCYC1
Predicted protein; Belongs to the cyclin family (330 aa)
     
 
  0.475
CDC6
Predicted protein (1107 aa)
     
   
  0.425
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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