STRINGSTRING
Phatr50630 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr50630" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr50630Predicted protein (971 aa)    
Predicted Functional Partners:
Phatr32036
Predicted protein (801 aa)
     
 
  0.998
Phatr14145
Predicted protein (516 aa)
     
 
  0.998
Phatr47058
Predicted protein (606 aa)
     
      0.997
Phatr15354
Predicted protein (300 aa)
     
 
  0.991
Phatr43447
Predicted protein (671 aa)
     
 
  0.989
Phatr8777
Predicted protein (110 aa)
     
 
  0.988
Phatr7810
Predicted protein (98 aa)
     
 
  0.987
Phatr25549
Predicted protein (512 aa)
     
 
  0.987
Phatr47176
Predicted protein (435 aa)
     
 
  0.985
Phatr25394
Predicted protein (528 aa)
     
 
  0.985
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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