STRINGSTRING
Phatr50671 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr50671" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr50671Predicted protein (407 aa)    
Predicted Functional Partners:
Phatr27838
Predicted protein (1040 aa)
     
 
  0.504
Phatr42307
Predicted protein (453 aa)
   
      0.476
Phatr49748
Predicted protein (2821 aa)
     
 
  0.469
Phatr44942
Predicted protein (556 aa)
     
 
  0.469
Phatr51277
Predicted protein (373 aa)
   
 
0.446
Phatr21789
Predicted protein; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis (559 aa)
   
        0.415
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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