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STRINGSTRING
Phatr50671 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr50671" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr50671Predicted protein (407 aa)    
Predicted Functional Partners:
Phatr27838
Predicted protein (1040 aa)
     
 
  0.861
Phatr44516
Predicted protein (208 aa)
     
   
  0.768
Phatr12896
GrpE protein, HSP90 cofactor, chloroplast targeted (540 aa)
     
   
  0.593
Phatr7072
Predicted protein (176 aa)
 
        0.590
Phatr32559
Predicted protein (361 aa)
     
   
  0.585
Phatr54813
Predicted protein (322 aa)
     
   
  0.583
MER3
Mer3 meiotic cross-over helicase (154 aa)
     
   
  0.583
Phatr25
Predicted protein (1589 aa)
     
   
  0.583
Phatr10674
Predicted protein; Belongs to the eIF-2B alpha/beta/delta subunits family (290 aa)
     
   
  0.572
Phatr49748
Predicted protein (2821 aa)
     
 
  0.565
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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