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STRINGSTRING
Phatr50770 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr50770" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr50770Predicted protein; Belongs to the FGGY kinase family (549 aa)    
Predicted Functional Partners:
Phatr1129
Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family (562 aa)
 
  0.952
TPI/GapC3
Triosephosphate isomerase/glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family (614 aa)
   
   
  0.840
Phatr9020
Predicted protein (364 aa)
 
 
   
  0.672
PEPCK1
Phosphoenolpyruvate carboxykinase (612 aa)
     
   
  0.655
Phatr30145
Citrate synthase; Belongs to the citrate synthase family (471 aa)
     
   
  0.646
Phatr20755
Predicted protein; Belongs to the MIP/aquaporin (TC 1.A.8) family (270 aa)
   
  0.629
Phatr16540
Predicted protein; Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family (432 aa)
           
  0.628
Phatrdraft1692
Predicted protein; Belongs to the MIP/aquaporin (TC 1.A.8) family (250 aa)
   
  0.624
RPN7
Regulatory proteasome non-atpase subunit 7 (330 aa)
     
 
  0.585
RPN3
Regulatory proteasome non-atpase subunit 3 (323 aa)
     
 
  0.583
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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