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STRINGSTRING
Phatr50796 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr50796" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr50796Predicted protein (457 aa)    
Predicted Functional Partners:
Phatr34493
Predicted protein (447 aa)
     
 
  0.998
Phatr17324
40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family (261 aa)
   
      0.981
Phatr25714
Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family (205 aa)
   
      0.980
Phatr48411
Predicted protein; Belongs to the universal ribosomal protein uS5 family (264 aa)
     
 
  0.979
Phatr51291
Predicted protein (121 aa)
   
 
  0.978
Phatr28694
Predicted protein (316 aa)
     
 
  0.974
Phatr43162
Predicted protein; Belongs to the universal ribosomal protein uL15 family (146 aa)
     
 
  0.973
Phatr33660
Predicted protein (253 aa)
   
      0.971
Phatr30660
Predicted protein (273 aa)
   
      0.971
Phatr23324
Predicted protein; Belongs to the universal ribosomal protein uL5 family (176 aa)
     
      0.971
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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