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Phatr50836 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr50836" - Alpha subunit of glucosidase in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr50836Alpha subunit of glucosidase (712 aa)    
Predicted Functional Partners:
Phatr54169
Alpha glucosidase II (802 aa)
     
  0.996
Phatrdraft36
Predicted protein (489 aa)
     
 
  0.905
Phatr42566
Predicted protein (220 aa)
     
  0.762
Phatr11781
Predicted protein (106 aa)
     
  0.762
Phatr54787
UDP-glucose-glycoprotein glucosyltransferase (166 aa)
     
 
  0.714
Phatr41172
Calreticulin (390 aa)
     
  0.592
Phatr9897
Predicted protein (101 aa)
     
    0.483
Phatr9171
Predicted protein (93 aa)
     
    0.483
Phatr8171
Predicted protein (86 aa)
     
    0.483
Trx-m
Thioredoxin m (91 aa)
     
    0.483
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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