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Phatr50848 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr50848" - Elongator complex protein 3 in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr50848Elongator complex protein 3; Catalytic histone acetyltransferase subunit of the RNA polymerase II elongator complex, which is a component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation (544 aa)    
Predicted Functional Partners:
Phatr43627
Predicted protein (1396 aa)
     
 
  0.994
Phatr19191
Predicted protein (289 aa)
     
 
  0.932
Phatr8694
Predicted protein (63 aa)
     
 
  0.903
MCM5
Predicted protein; Belongs to the MCM family (667 aa)
     
   
  0.901
Phatr9446
Predicted protein (220 aa)
   
   
  0.900
Phatr51406
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family (297 aa)
     
 
  0.802
myst
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family (349 aa)
     
 
  0.802
HAT
Histone acetyltransferase (520 aa)
           
  0.799
Phatr4708
Predicted protein (220 aa)
     
 
  0.780
Phatr4674
Predicted protein (252 aa)
     
 
  0.780
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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