STRINGSTRING
Phatr50964 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr50964" - O-acetylhomoserine in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr50964O-acetylhomoserine (443 aa)    
Predicted Functional Partners:
METH
Methionine synthase (1245 aa)
       
  0.865
Phatr22113
Bifunctional aspartokinase (870 aa)
       
  0.852
Phatr16499
Predicted protein (378 aa)
 
 
  0.804
Phatr54915
Eukaryotic cysteine synthase (356 aa)
     
  0.703
Phatrdraft542
Cysteine synthase (336 aa)
       
  0.671
Cbs
Predicted protein (469 aa)
     
  0.671
cysK
Cysteine synthase (342 aa)
       
  0.671
Phatr19901
Predicted protein (900 aa)
   
   
  0.628
Phatr48694
Homoserine dehydrogenase (437 aa)
       
  0.578
Phatr26813
Homoserine dehydrogenase (456 aa)
       
  0.578
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
Server load: low (10%) [HD]