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STRINGSTRING
Phatr50971 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr50971" - annotation not available in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr50971annotation not available (427 aa)    
Predicted Functional Partners:
TPI/GapC3
Triosephosphate isomerase/glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family (614 aa)
   
 
  0.697
Phatr51092
Glutamine synthetase (416 aa)
   
   
  0.644
MDH
Predicted protein; Belongs to the LDH/MDH superfamily (324 aa)
   
   
  0.643
GltX
Ferredoxin-dependent glutamate synthase, fusion of large and small subunits (1591 aa)
   
 
  0.595
Phatr24739
Predicted protein (1594 aa)
   
 
  0.595
GltD
Synthase of glutamate synthase (580 aa)
   
 
  0.595
P5CS
Delta-1-pyrroline-5-carboxylate synthase; Delta l-pyrroline-5-carboxylate synthetase; In the C-terminal section; belongs to the gamma- glutamyl phosphate reductase family (747 aa)
         
  0.583
Phatr18027
Predicted protein (706 aa)
         
  0.583
AAT_2
Aspartate aminotransferase (426 aa)
     
 
  0.544
AAT_1
Aspartate transaminase (435 aa)
     
 
  0.544
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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