STRINGSTRING
Phatr50971 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr50971" - Annotation not available in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr50971Annotation not available (427 aa)    
Predicted Functional Partners:
GltX
Ferredoxin-dependent glutamate synthase, fusion of large and small subunits (1591 aa)
   
 
  0.994
Phatr24739
Predicted protein (1594 aa)
   
 
  0.994
ACL
Atp-citrate synthase (1082 aa)
   
   
  0.744
P5CS
Delta l-pyrroline-5-carboxylate synthetase (747 aa)
       
  0.741
Phatr18027
Predicted protein (706 aa)
       
  0.741
Phatr14762
Isocitrate dehydrogenase (357 aa)
     
  0.625
FAO1
Peroxisomal bifunctional enzyme (767 aa)
       
  0.592
Phatr35240
Predicted protein (684 aa)
       
  0.592
TPI/GapC3
Triosephosphate isomerase/glyceraldehyde-3-phosphate dehydrogenase (614 aa)
   
   
  0.585
Phatrdraft475
Predicted protein (464 aa)
   
 
  0.575
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
Server load: low (18%) [HD]