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Phatr51007 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr51007" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr51007Predicted protein (296 aa)    
Predicted Functional Partners:
Phatr15757
Predicted protein (181 aa)
     
  0.998
Phatr17974
Predicted protein (475 aa)
     
  0.992
Phatr46994
Predicted protein (730 aa)
     
  0.992
Phatr45356
Predicted protein (479 aa)
     
 
  0.985
Phatr14145
Predicted protein (516 aa)
     
  0.985
Phatr35966
Predicted protein (488 aa)
     
      0.984
Phatr43574
Predicted protein; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (499 aa)
     
  0.984
Phatr47058
Predicted protein (606 aa)
     
      0.983
Phatr51897
Predicted protein (531 aa)
     
      0.980
Phatr21557
Predicted protein (348 aa)
     
 
  0.979
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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