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STRINGSTRING
Pt-MAD2 protein (Phaeodactylum tricornutum) - STRING interaction network
"Pt-MAD2" - Mitotic checkpoint protein with homology with MAD2 in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pt-MAD2Mitotic checkpoint protein with homology with MAD2 (215 aa)    
Predicted Functional Partners:
Phatr10954
Predicted protein (209 aa)
     
 
  0.997
Pt-BUB3
WD40 mitotic checkpoint-like protein similar to spleen mitotic checkpoint BUB3 (397 aa)
     
 
  0.997
Pt-MAD1
Mitotic spindle assembly checkpoint protein (1315 aa)
     
 
  0.994
APC6
Predicted protein (381 aa)
     
 
  0.987
APC10
Predicted protein (148 aa)
     
 
  0.987
APC8
Predicted protein (648 aa)
     
 
  0.986
APC3
Predicted protein (336 aa)
     
 
  0.986
Pt-KIF3
Kinesin family-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family (953 aa)
     
 
  0.984
Phatr13779
Predicted protein; Belongs to the AAA ATPase family (304 aa)
     
 
  0.983
Phatr43664
Predicted protein (655 aa)
     
 
  0.967
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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