Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but resolution at 400 dpi
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as simple tabular text output:
TSV: tab separated values - can be opened in Excel
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and annotated functions of the network proteins
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
H2B-1a | H3-1a | Phatr54360 | Phatr50872 | Histone H2B; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling | Histone H3 | 0.930 |
H2B-1a | H3.3 | Phatr54360 | Phatr21239 | Histone H2B; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling | Histone H3 | 0.930 |
H2B-1a | Phatr11841 | Phatr54360 | Phatr11841 | Histone H2B; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling | Histone H3 | 0.930 |
H2B-1a | Phatr16843 | Phatr54360 | Phatr16843 | Histone H2B; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling | Histone H3 | 0.930 |
H2B-1a | Phatr50695 | Phatr54360 | Phatr50695 | Histone H2B; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling | Histone H3 | 0.930 |
H2B-1a | Phatr51026 | Phatr54360 | Phatr51026 | Histone H2B; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling | Histone deacetylase | 0.879 |
H3-1a | H2B-1a | Phatr50872 | Phatr54360 | Histone H3 | Histone H2B; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling | 0.930 |
H3-1a | NURF-55 | Phatr50872 | Phatr17948 | Histone H3 | Chromatin assembly factor subunit c | 0.883 |
H3-1a | Phatr11823 | Phatr50872 | Phatr11823 | Histone H3 | Histone H2B | 0.930 |
H3-1a | Phatr13057 | Phatr50872 | Phatr13057 | Histone H3 | Predicted protein | 0.625 |
H3-1a | Phatr24019 | Phatr50872 | Phatr24019 | Histone H3 | Predicted protein | 0.625 |
H3-1a | Phatr51026 | Phatr50872 | Phatr51026 | Histone H3 | Histone deacetylase | 0.889 |
H3.3 | H2B-1a | Phatr21239 | Phatr54360 | Histone H3 | Histone H2B; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling | 0.930 |
H3.3 | NURF-55 | Phatr21239 | Phatr17948 | Histone H3 | Chromatin assembly factor subunit c | 0.883 |
H3.3 | Phatr11823 | Phatr21239 | Phatr11823 | Histone H3 | Histone H2B | 0.930 |
H3.3 | Phatr13057 | Phatr21239 | Phatr13057 | Histone H3 | Predicted protein | 0.625 |
H3.3 | Phatr24019 | Phatr21239 | Phatr24019 | Histone H3 | Predicted protein | 0.625 |
H3.3 | Phatr51026 | Phatr21239 | Phatr51026 | Histone H3 | Histone deacetylase | 0.889 |
NURF-55 | H3-1a | Phatr17948 | Phatr50872 | Chromatin assembly factor subunit c | Histone H3 | 0.883 |
NURF-55 | H3.3 | Phatr17948 | Phatr21239 | Chromatin assembly factor subunit c | Histone H3 | 0.883 |
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