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STRINGSTRING
Phatr51058 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr51058" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr51058Predicted protein (255 aa)    
Predicted Functional Partners:
Phatr10862
annotation not available (309 aa)
     
 
  0.997
Phatr29711
Predicted protein (221 aa)
   
 
  0.997
Phatr24978
Predicted protein (506 aa)
 
 
  0.997
Phatr31133
Predicted protein (115 aa)
   
 
  0.996
Phatr27923
Predicted protein (623 aa)
 
 
  0.994
Phatr21030
V-type proton ATPase subunit; Subunit of the integral membrane V0 complex of vacuolar ATPase. Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system (390 aa)
   
 
  0.992
Phatr28794
V-type proton ATPase subunit a; Essential component of the vacuolar proton pump (V- ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase (818 aa)
   
 
  0.973
Phatr44050
V-type proton ATPase subunit G; Catalytic subunit of the peripheral V1 complex of vacuolar ATPase (V-ATPase). V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells (125 aa)
     
 
  0.971
Phatr11649
Predicted protein; Belongs to the V-ATPase proteolipid subunit family (173 aa)
   
 
  0.967
Phatr43023
Predicted protein (524 aa)
     
 
  0.935
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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