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SybF protein (Phaeodactylum tricornutum) - STRING interaction network
"SybF" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SybFPredicted protein (200 aa)    
Predicted Functional Partners:
GOS
Predicted protein (223 aa)
     
  0.985
Phatr13691
Predicted protein (121 aa)
     
  0.984
Phatr9033
Predicted protein (268 aa)
     
  0.984
SLY1
Predicted protein (648 aa)
       
  0.974
SybE
Predicted protein (227 aa)
       
0.964
SytB
Predicted protein (260 aa)
     
  0.961
SNAP
Predicted protein (313 aa)
     
  0.921
UNC18
Predicted protein (588 aa)
       
  0.801
Phatr43244
Predicted protein (165 aa)
         
    0.800
Phatr40521
Predicted protein (203 aa)
         
    0.800
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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