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Phatr51092 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr51092" - Glutamine synthetase in Phaeodactylum tricornutum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr51092Glutamine synthetase (416 aa)    
Predicted Functional Partners:
GltX
Ferredoxin-dependent glutamate synthase, fusion of large and small subunits (1591 aa)
   
 
  0.994
Phatr24739
Predicted protein (1594 aa)
   
 
  0.994
GltD
Synthase of glutamate synthase (580 aa)
   
 
  0.966
Phatr13951
Predicted protein (450 aa)
   
 
  0.964
Phatr24195
CPS III, carbamoyl-phosphate synthase mitochindrial (1463 aa)
   
  0.960
Phatr12902
Predicted protein (536 aa)
         
  0.950
Phatr31906
Aldehyde dehydrogenase (551 aa)
       
  0.943
Phatr45239
Predicted protein (1097 aa)
         
  0.935
GFA1
Glutamine-fructose-6-phosphate transaminase (606 aa)
   
 
  0.931
Phatr54476
Formidase (451 aa)
       
    0.900
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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