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Ran1 protein (Phaeodactylum tricornutum) - STRING interaction network
"Ran1" - GTP-binding nuclear protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ran1GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle (213 aa)    
Predicted Functional Partners:
Phatr24186
Predicted protein (1088 aa)
     
  0.977
Phatr48534
Predicted protein (1026 aa)
     
  0.959
Phatr42712
Predicted protein (219 aa)
     
 
  0.946
Phatr15688
Predicted protein (121 aa)
     
 
  0.942
Phatr29967
Predicted protein (871 aa)
     
 
  0.918
Phatr54869
Predicted protein (445 aa)
     
 
  0.911
Phatr28737
Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis (439 aa)
     
 
  0.854
EF-1
Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis (439 aa)
     
 
  0.854
Phatr42636
Predicted protein (897 aa)
     
 
  0.847
Phatr13520
Nuclear cap-binding protein subunit 2 (127 aa)
     
 
  0.836
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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