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GltX protein (Phaeodactylum tricornutum) - STRING interaction network
"GltX" - Ferredoxin-dependent glutamate synthase, fusion of large and small subunits in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GltXFerredoxin-dependent glutamate synthase, fusion of large and small subunits (1591 aa)    
Predicted Functional Partners:
Phatr13951
Predicted protein (450 aa)
   
  0.999
GltD
Synthase of glutamate synthase (580 aa)
  0.999
Phatr24739
Predicted protein (1594 aa)
 
0.999
Phatr41702
Predicted protein (671 aa)
     
 
  0.995
TRPB
Tryptophan synthase, beta chain (385 aa)
     
 
  0.995
Phatr51092
Glutamine synthetase (416 aa)
   
 
  0.994
Phatr50971
Annotation not available (427 aa)
   
 
  0.994
GLNA
GLNA, glutamine synthase (716 aa)
       
  0.992
Phatr47025
Alanine racemase (710 aa)
     
 
  0.981
Phatr43018
Predicted protein (509 aa)
   
  0.980
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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