STRINGSTRING
Phatr51277 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr51277" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr51277Predicted protein (373 aa)    
Predicted Functional Partners:
Phatr42307
Predicted protein (453 aa)
   
      0.589
Phatr43574
Predicted protein; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (499 aa)
     
        0.523
Phatr34538
Predicted protein (320 aa)
     
        0.510
Phatr45356
Predicted protein (479 aa)
     
      0.506
Phatr21789
Predicted protein; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis (559 aa)
   
        0.477
Phatr49748
Predicted protein (2821 aa)
       
 
  0.463
Phatr44942
Predicted protein (556 aa)
       
 
  0.463
Phatr14145
Predicted protein (516 aa)
     
   
  0.459
Phatr30446
T-complex protein 1 subunit delta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis (529 aa)
   
        0.452
Phatr46608
Predicted protein (1443 aa)
       
      0.452
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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