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Phatr5128 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr5128" - Proteasome subunit beta type in Phaeodactylum tricornutum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurence
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[Homology]
Score
Phatr5128Proteasome subunit beta type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family (197 aa)    
Predicted Functional Partners:
Phatr28202
Proteasome subunit alpha type (245 aa)
   
 
  0.965
Phatr53939
Proteasome endopeptidase complex; Proteasome alpha 1 subunit; Belongs to the peptidase T1A family (245 aa)
   
 
  0.963
Phatr30067
Predicted protein; Belongs to the AAA ATPase family (403 aa)
     
 
  0.957
Phatrdraft866
Proteasome subunit beta; Belongs to the peptidase T1B family (248 aa)
     
 
  0.957
Phatr5685
Proteasome subunit alpha type (258 aa)
     
 
  0.955
Phatr9090
Predicted protein; Belongs to the AAA ATPase family (431 aa)
   
 
  0.954
Phatr24474
Proteasome subunit alpha type (264 aa)
     
 
  0.942
Phatr28219
Predicted protein; Belongs to the AAA ATPase family (447 aa)
     
 
  0.941
Phatr45122
Predicted protein; Belongs to the AAA ATPase family (421 aa)
   
 
  0.940
Phatr19341
Predicted protein (199 aa)
   
 
  0.939
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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