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helicase_5 protein (Phaeodactylum tricornutum) - STRING interaction network
"helicase_5" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
helicase_5Predicted protein (428 aa)    
Predicted Functional Partners:
Phatr44632
Predicted protein (1440 aa)
       
  0.976
Phatr23164
Predicted protein (489 aa)
   
  0.867
Phatr23865
Predicted protein (720 aa)
     
  0.864
Phatr33540
Predicted protein (155 aa)
     
  0.853
Phatrdraft1638
Predicted protein (548 aa)
     
  0.842
helicase_7
Predicted protein (422 aa)
     
  0.827
Phatr41756
Predicted protein (651 aa)
     
  0.827
Phatr20716
Predicted protein (138 aa)
     
  0.804
Phatr24439
Predicted protein (357 aa)
     
  0.800
Phatr43680
Predicted protein (1458 aa)
       
 
  0.776
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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