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STRINGSTRING
helicase_5 protein (Phaeodactylum tricornutum) - STRING interaction network
"helicase_5" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
helicase_5Predicted protein (428 aa)    
Predicted Functional Partners:
Phatr44632
Predicted protein (1440 aa)
     
 
  0.965
Phatr43990
Predicted protein (313 aa)
     
 
  0.943
Phatr33540
Predicted protein (155 aa)
     
 
  0.935
Phatr47759
Predicted protein (790 aa)
     
 
  0.930
Phatr47180
Predicted protein (610 aa)
     
 
  0.921
Phatr24439
Predicted protein (357 aa)
     
 
  0.913
Phatr7426
Predicted protein (81 aa)
   
 
  0.876
Phatr27039
Predicted protein (634 aa)
     
 
  0.867
Phatr34493
Predicted protein (447 aa)
     
 
  0.859
Phatr48787
Predicted protein (247 aa)
     
 
  0.846
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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