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Phatr51345 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr51345" - Histone acetyltransferase in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr51345Histone acetyltransferase (149 aa)    
Predicted Functional Partners:
Phatr21420
Predicted protein (743 aa)
     
 
  0.915
Phatr47883
Predicted protein (1054 aa)
     
 
  0.833
Phatr10595
Predicted protein (192 aa)
     
 
  0.832
Phatr40101
Predicted protein (673 aa)
     
 
  0.809
Phatr11358
Predicted protein (184 aa)
     
   
  0.757
Phatr11710
Predicted protein (143 aa)
     
 
0.690
UBI3
Ubiquitin extension protein 3 (155 aa)
     
 
  0.597
Phatr28979
Predicted protein; Belongs to the universal ribosomal protein uL11 family (164 aa)
     
   
  0.453
Phatr50825
RuvB-like helicase; Belongs to the RuvB family (451 aa)
   
        0.438
Phatr13119
Predicted protein (270 aa)
   
        0.425
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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