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Phatr51406 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr51406" - Histone acetyltransferase in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr51406Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family (297 aa)    
Predicted Functional Partners:
H2A-m1
Histone H2A (138 aa)
     
 
  0.891
Phatr6586
Predicted protein (152 aa)
     
 
  0.851
Phatr42995
Enhancer of polycomb-like protein (549 aa)
     
 
  0.834
Phatr42892
Predicted protein; Belongs to the PI3/PI4-kinase family (4067 aa)
     
 
  0.830
H4-1a
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling (103 aa)
     
 
  0.819
H4-1b
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling (103 aa)
     
 
  0.819
Phatr45548
Predicted protein (613 aa)
     
 
  0.815
Phatr47619
Predicted protein (1565 aa)
     
 
  0.813
Phatr50848
Elongator complex protein 3; Catalytic histone acetyltransferase subunit of the RNA polymerase II elongator complex, which is a component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation (544 aa)
     
 
  0.802
Phatr45764
Predicted protein (1603 aa)
     
 
  0.753
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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