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Phatr51407 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr51407" - Pol1-like DNA polymerase in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr51407Pol1-like DNA polymerase (774 aa)    
Predicted Functional Partners:
Phatr17228
Predicted protein (389 aa)
  0.977
PK6
Pyruvate kinase (553 aa)
       
  0.937
PK3
Pyruvate kinase (543 aa)
       
  0.937
PK2
Pyruvate kinase (513 aa)
       
  0.937
PK5
Pyruvate kinase (543 aa)
       
  0.937
POLA
DNA polymerase (1147 aa)
     
  0.908
NDK2
Nucleoside diphosphate kinase (148 aa)
   
 
  0.906
NDK1
Nucleoside diphosphate kinase (152 aa)
   
 
  0.906
NDK3
Nucleoside diphosphate kinase (217 aa)
   
 
  0.906
Phatr52678
DNA polymerase (2155 aa)
     
  0.902
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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