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GluRS_1 protein (Phaeodactylum tricornutum) - STRING interaction network
"GluRS_1" - Glutamate-trna ligase in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GluRS_1Glutamate-trna ligase (523 aa)    
Predicted Functional Partners:
Phatr26176
Predicted protein (408 aa)
     
  0.975
Phatr29824
Predicted protein (1177 aa)
   
  0.970
HemA
Glutamyl-tRNA reductase (512 aa)
         
  0.967
Phatr8112
Predicted protein (88 aa)
   
  0.949
Phatr16545
Predicted protein (167 aa)
   
  0.949
Phatr13445
Predicted protein (164 aa)
   
  0.949
Phatr11830
Predicted protein (161 aa)
   
  0.949
Phatr10666
Predicted protein (102 aa)
   
  0.949
Phatr11088
Predicted protein (1086 aa)
   
  0.932
Phatr42051
Predicted protein (579 aa)
   
  0.905
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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