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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Phatr5145 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr5145" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr5145Predicted protein (226 aa)    
Predicted Functional Partners:
Phatr29702
Predicted protein (878 aa)
 
   
  0.818
Phatr41745
Predicted protein (351 aa)
 
 
        0.736
SMC3
Predicted protein (1232 aa)
           
  0.621
Phatr44165
Structural maintenance of chromosomes protein (1356 aa)
           
  0.621
P5CS
Delta-1-pyrroline-5-carboxylate synthase; Delta l-pyrroline-5-carboxylate synthetase; In the C-terminal section; belongs to the gamma- glutamyl phosphate reductase family (747 aa)
           
  0.582
Phatr18027
Predicted protein (706 aa)
           
  0.582
Phatr39772
Predicted protein (432 aa)
   
   
  0.511
Phatr10187
Predicted protein (171 aa)
 
            0.454
Phatr9706
Predicted protein (169 aa)
   
   
  0.443
Phatr16606
Predicted protein (130 aa)
     
 
  0.435
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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