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Phatr51541 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr51541" - Methionine-dependent methyltransferase in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr51541Methionine-dependent methyltransferase (214 aa)    
Predicted Functional Partners:
Gsr_2
Glutathione reductase; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family (496 aa)
           
  0.559
Phatr21030
V-type proton ATPase subunit; Subunit of the integral membrane V0 complex of vacuolar ATPase. Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system (390 aa)
           
  0.559
Lhcf12
Protein fucoxanthin chlorophyll protein (193 aa)
           
  0.559
Lhcr1
Protein fucoxanthin chlorophyll a/c protein (168 aa)
           
  0.557
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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