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Phatr51560 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr51560" - Short-chain dehydrogenase/reductase in Phaeodactylum tricornutum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
Coexpression
Experiments
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[Homology]
Score
Phatr51560Short-chain dehydrogenase/reductase (205 aa)    
Predicted Functional Partners:
PTD9
Desaturase delta 9 desaturase; Belongs to the fatty acid desaturase type 1 family (333 aa)
     
 
  0.638
PDHB1
Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2 (360 aa)
     
 
  0.510
ACL1
Precursor of ligase long chain acyl-coa ligase (678 aa)
         
  0.499
FABFa
3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the beta-ketoacyl-ACP synthases family (433 aa)
           
  0.490
KCT3
Beta-ketoacyl-CoA thiolase; Belongs to the thiolase family (457 aa)
     
   
  0.478
Phatr40988
3-hydroxyisobutyryl-CoA hydrolase, mitochondrial; Hydrolyzes 3-hydroxyisobutyryl-CoA (HIBYL-CoA), a saline catabolite; Belongs to the enoyl-CoA hydratase/isomerase family (356 aa)
     
   
  0.472
PK3
Pyruvate kinase; Belongs to the pyruvate kinase family (543 aa)
         
  0.468
GapC2b
Glyceraldehyde-3-phosphate dehydrogenase (334 aa)
           
  0.457
GAPDH_3
Glyceraldehyde-3-phosphate dehydrogenase (351 aa)
           
  0.457
PDHA1
Pyruvate dehydrogenase E1 component subunit alpha; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) (413 aa)
     
   
  0.456
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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