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RNAse-H protein (Phaeodactylum tricornutum) - STRING interaction network
"RNAse-H" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNAse-HPredicted protein (190 aa)    
Predicted Functional Partners:
Phatr9255
Predicted protein (278 aa)
           
  0.510
HSP70A
Protein heat shock protein Hsp70 (653 aa)
           
  0.510
GDCP
Glycine decarboxylase p-protein (1005 aa)
           
  0.510
POLA
DNA polymerase (1147 aa)
           
  0.479
Phatr54677
DNA polymerase (1087 aa)
           
  0.479
Phatr52678
DNA polymerase (2155 aa)
           
  0.479
ADH_1
Alcohol dehydrogenase (353 aa)
           
  0.424
ADH_2
Alcohol dehydrogenase (340 aa)
           
  0.424
FAO1
Peroxisomal bifunctional enzyme (767 aa)
           
  0.424
GPT1
Glycerol-3-phosphate o-acyltransferase (551 aa)
           
  0.422
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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