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STRINGSTRING
Phatr51609 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr51609" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr51609Predicted protein (529 aa)    
Predicted Functional Partners:
Phatr13175
Predicted protein (391 aa)
     
 
  0.945
Phatrdraft913
S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP (386 aa)
   
 
  0.928
Phatr25000
Predicted protein; Catalyzes the formation of formate and 2-keto-4- methylthiobutyrate (KMTB) from 1,2-dihydroxy-3-keto-5- methylthiopentene (DHK-MTPene); Belongs to the acireductone dioxygenase (ARD) family (221 aa)
   
 
  0.915
METH
Methionine synthase (1245 aa)
     
 
  0.903
AAT_2
Aspartate aminotransferase (426 aa)
     
  0.901
AAT_1
Aspartate transaminase (435 aa)
     
  0.901
TYR1
Tyrosinase (546 aa)
         
    0.900
Phatr49112
Predicted protein (494 aa)
     
   
  0.872
Phatr50281
Predicted protein (417 aa)
   
   
  0.868
Phatr51092
Glutamine synthetase (416 aa)
   
 
  0.838
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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