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Phatr51708 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr51708" - Flavin-containing amine oxidase in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr51708Flavin-containing amine oxidase (418 aa)    
Predicted Functional Partners:
Phatr51026
Histone deacetylase (426 aa)
     
  0.732
Phatr49800
Histone deacetylase (426 aa)
     
  0.732
Phatr45431
Predicted protein (1158 aa)
     
  0.565
H3-1a
Histone H3 (136 aa)
       
  0.545
Phatr50695
Histone H3 (136 aa)
       
  0.545
H3.3
Histone H3 (136 aa)
       
  0.545
Phatr16843
Histone H3 (104 aa)
       
  0.545
Phatr11841
Histone H3 (136 aa)
       
  0.545
SMC6
Predicted protein (220 aa)
       
      0.512
H2A-m1
Histone H2A (138 aa)
         
  0.484
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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