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Phatr51806 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr51806" - Inner membrane protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr51806Inner membrane protein (441 aa)    
Predicted Functional Partners:
secA
Protein translocase subunit secA (935 aa)
         
  0.514
Phatr52412
Channel voltage activated chloride channel (693 aa)
           
  0.510
Phatr46097
Predicted protein (980 aa)
           
  0.510
Phatr28737
Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis (439 aa)
           
  0.510
Phatr28245
Voltage activated chloride channel CLC7 type (768 aa)
           
  0.510
Phatr31650
Solute carrier (590 aa)
         
  0.499
EF-1
Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis (439 aa)
           
  0.447
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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