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STRINGSTRING
Phatr51869 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr51869" - Myo-inositol 2-dehydrogenase in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr51869Myo-inositol 2-dehydrogenase (301 aa)    
Predicted Functional Partners:
Phatr18323
Inositol-1-monophosphatase (288 aa)
       
  0.921
Phatr43010
Predicted protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family (219 aa)
          
    0.900
MMSDH
Methylmalonate semialdhyde dehydrogenase (530 aa)
      
   
  0.560
Phatr15495
Glucokinase (235 aa)
         
  0.465
Trx-o
Thioredoxin; Belongs to the thioredoxin family (106 aa)
            
  0.455
FBPC2
Plastidic inositol phosphatase; Belongs to the FBPase class 1 family (351 aa)
      
   
  0.445
TPI/GapC3
Triosephosphate isomerase/glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family (614 aa)
   
   
  0.410
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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