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Phatr51869 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr51869" - Myo-inositol 2-dehydrogenase in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr51869Myo-inositol 2-dehydrogenase (301 aa)    
Predicted Functional Partners:
Phatr18323
Predicted protein (288 aa)
       
  0.910
Phatr43010
Predicted protein (219 aa)
          
    0.900
Phatr45701
Predicted protein (444 aa)
   
 
  0.608
Phatr12989
Predicted protein (363 aa)
   
 
  0.608
MMSDH
Methylmalonate semialdhyde dehydrogenase (530 aa)
          
  0.553
UGP/PGM
UDP-Glucose-Pyrophosphorylase/Phosphoglucomutase (629 aa)
      
   
  0.512
Phatr13356
6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) (505 aa)
         
  0.500
FBPC2
Plastidic inositol phosphatase (351 aa)
            
  0.488
Trx-f
Thioredoxin f (107 aa)
         
  0.478
Phatr42437
Predicted protein (428 aa)
   
 
  0.471
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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