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MSH4 protein (Phaeodactylum tricornutum) - STRING interaction network
"MSH4" - Muts-like protein 4 in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MSH4Muts-like protein 4 (116 aa)    
Predicted Functional Partners:
Mlh1
Mutl-like protein 1 (695 aa)
 
 
  0.967
Phatr14607
Predicted protein (337 aa)
 
 
  0.947
SMC5
Predicted protein (1099 aa)
     
 
  0.923
Phatr54612
Ercc4-like protein (736 aa)
     
 
  0.921
SMC6
Predicted protein (220 aa)
     
 
  0.914
Phatr13779
Predicted protein; Belongs to the AAA ATPase family (304 aa)
   
 
  0.914
Phatr54296
Mnd1 meiotic DNA recombination/cross-over promotion; Required for proper homologous chromosome pairing and efficient cross-over and intragenic recombination during meiosis (206 aa)
     
 
  0.912
MER3
Mer3 meiotic cross-over helicase (154 aa)
     
 
  0.898
Phatr44595
Mitotic cohesin (663 aa)
     
 
  0.874
Phatr47619
Predicted protein (1565 aa)
     
 
  0.833
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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