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Phatr52110 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr52110" - Putative uncharacterized protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr52110Putative uncharacterized protein (427 aa)    
Predicted Functional Partners:
Phatr48664
Predicted protein (504 aa)
       
    0.900
Phatr40163
Predicted protein (371 aa)
         
    0.900
Phatr45548
Predicted protein (613 aa)
       
      0.898
Phatr4016
Predicted protein (248 aa)
       
 
  0.779
Phatr12368
Predicted protein (126 aa)
       
 
  0.779
Phatr26649
Predicted protein; Converts O-phosphoseryl-tRNA(Sec) to selenocysteinyl- tRNA(Sec) required for selenoprotein biosynthesis (512 aa)
   
  0.754
Phatr2217
Predicted protein (364 aa)
   
  0.754
Phatr15730
Predicted protein (442 aa)
   
  0.754
GAPN
Glyceraldehyde-3-phosphate dehydrogenase (588 aa)
   
  0.736
Phatr31906
Aldehyde dehydrogenase (551 aa)
   
  0.736
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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