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MSH5 protein (Phaeodactylum tricornutum) - STRING interaction network
"MSH5" - Muts-like protein 5 in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MSH5Muts-like protein 5 (376 aa)    
Predicted Functional Partners:
Mlh1
Mutl-like protein 1 (695 aa)
 
 
  0.966
Phatr14607
Predicted protein (337 aa)
 
 
  0.957
Phatr54612
Ercc4-like protein (736 aa)
     
 
  0.920
Phatr54296
Mnd1 meiotic DNA recombination/cross-over promotion; Required for proper homologous chromosome pairing and efficient cross-over and intragenic recombination during meiosis (206 aa)
     
   
  0.910
Phatr44595
Mitotic cohesin (663 aa)
     
 
  0.910
MER3
Mer3 meiotic cross-over helicase (154 aa)
     
 
  0.893
Phatr13779
Predicted protein; Belongs to the AAA ATPase family (304 aa)
   
 
  0.862
Phatr47619
Predicted protein (1565 aa)
     
 
  0.831
Phatr36531
Type II DNA topoisomerase VI subunit (432 aa)
     
 
  0.785
TOP6A
Type II DNA topoisomerase VI subunit (430 aa)
     
 
  0.785
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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