• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
ADH_1 protein (Phaeodactylum tricornutum) - STRING interaction network
"ADH_1" - Alcohol dehydrogenase in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADH_1Alcohol dehydrogenase (353 aa)    
Predicted Functional Partners:
Phatr19659
Iron-containing dehydrogenase (465 aa)
   
 
  0.791
TPI/GapC3
Triosephosphate isomerase/glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family (614 aa)
     
   
  0.714
Phatr17427
Predicted protein (695 aa)
 
 
 
0.687
GAPN
Glyceraldehyde-3-phosphate dehydrogenase (588 aa)
   
 
  0.624
Phatr54983
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria (891 aa)
         
  0.590
MS
Malate synthase; Belongs to the malate synthase family (553 aa)
     
   
  0.589
Phatr17238
Anthranilate synthase (958 aa)
   
   
  0.586
Phatr31367
Predicted protein (819 aa)
   
 
  0.481
ADH_2
Alcohol dehydrogenase (340 aa)
 
 
 
0.468
Phatr16540
Predicted protein; Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family (432 aa)
   
 
  0.467
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
Server load: low (6%) [HD]