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STRINGSTRING
Phatr52248 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr52248" - Alpha mannosidase in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr52248Alpha mannosidase (173 aa)    
Predicted Functional Partners:
Phatr54844
Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (413 aa)
     
   
  0.905
Phatr3832
Predicted protein (349 aa)
     
   
  0.798
Phatr50836
Alpha subunit of glucosidase; Belongs to the glycosyl hydrolase 31 family (712 aa)
     
 
  0.670
Phatrdraft36
alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family (489 aa)
     
   
  0.621
Phatr29758
Aminopeptidase (895 aa)
     
   
  0.578
Phatr29309
Predicted protein (842 aa)
     
   
  0.578
Phatr44086
Predicted protein (794 aa)
     
   
  0.475
Phatr45496
Betaxylosyltransferase (483 aa)
       
 
  0.469
Phatr52551
Predicted protein (600 aa)
           
  0.426
GOS
Predicted protein (223 aa)
           
  0.422
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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