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STRINGSTRING
Phatr52268 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr52268" - Lysophospholipase in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr52268Lysophospholipase (209 aa)    
Predicted Functional Partners:
Phatr33720
Predicted protein (260 aa)
   
   
 
0.817
Phatr10362
Predicted protein (299 aa)
         
  0.717
Phatr6834
Predicted protein (143 aa)
       
 
  0.706
Phatr10454
Predicted protein (298 aa)
   
   
  0.674
Phatr18132
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family (377 aa)
           
  0.638
Phatrdraft1578
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family (839 aa)
           
  0.626
Phatr17427
Predicted protein (695 aa)
   
   
  0.442
Phatr7108
Predicted protein (138 aa)
           
  0.428
Phatr48947
Glycylpeptide N-tetradecanoyltransferase; Adds a myristoyl group to the N-terminal glycine residue of certain cellular proteins (343 aa)
     
   
  0.426
Phatr35101
Predicted protein (570 aa)
   
      0.410
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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