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Phatr52346 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr52346" - alpha-1,2-Mannosidase in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr52346alpha-1,2-Mannosidase; Mannosyl-oligosaccharide alpha-1,2-mannosidase; Belongs to the glycosyl hydrolase 47 family (509 aa)    
Predicted Functional Partners:
Phatr54787
UDP-glucose-glycoprotein glucosyltransferase (166 aa)
     
   
  0.916
Phatr44574
Mannosyltransferase (556 aa)
           
  0.855
Phatr41172
Calreticulin (390 aa)
     
   
  0.849
Phatr11248
Predicted protein (167 aa)
           
  0.838
Phatr44425
Alpha-mannosyltransferase (581 aa)
     
   
  0.798
Phatr45572
Predicted protein (398 aa)
     
   
  0.797
Sec61alpha
Transport protein Sec61 alpha subunit; Belongs to the SecY/SEC61-alpha family (472 aa)
     
   
  0.786
Phatr48662
Predicted protein (998 aa)
     
 
  0.745
Phatr32877
Predicted protein (290 aa)
     
 
  0.745
hHrd1
Predicted protein (632 aa)
     
   
  0.716
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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