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STRINGSTRING
CATR2 protein (Phaeodactylum tricornutum) - STRING interaction network
"CATR2" - Caltractin in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CATR2Caltractin (192 aa)    
Predicted Functional Partners:
Phatr43680
Predicted protein (1458 aa)
     
 
  0.877
RAD4
Xeroderma pigmentosum group (857 aa)
     
 
  0.854
Gamma-tub
Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome (468 aa)
     
 
  0.805
hRad23
RAD23 (434 aa)
     
 
  0.707
Phatr13237
Predicted protein (241 aa)
     
 
  0.706
Phatr21122
Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain (447 aa)
     
 
  0.703
Phatr10628
Serine/threonine-protein kinase PLK (575 aa)
     
 
  0.694
Spc97
Spc97 (1274 aa)
     
 
  0.681
Pt-Spc98
Spindle pole body component; Spc98 (843 aa)
     
   
  0.679
Phatr26176
Predicted protein (408 aa)
     
 
  0.670
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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