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ATPase2-1B protein (Phaeodactylum tricornutum) - STRING interaction network
"ATPase2-1B" - P1B, P type ATPase in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATPase2-1BP1B, P type ATPase (827 aa)    
Predicted Functional Partners:
Phatr54805
Atpase2-p5 (1181 aa)
     
  0.705
ATPase1-P5
P5, P type ATPase (1138 aa)
     
  0.705
Phatr47992
Predicted protein (432 aa)
     
 
  0.651
Phatr53964
Probable calcium ATPase (1006 aa)
     
0.635
Phatr228
Probable serca-type calcium ATPase (1028 aa)
     
0.635
Phatr23629
Predicted protein (982 aa)
     
0.635
ATPase2-3A
P3A, P type ATPase (969 aa)
     
0.635
ATPase-3A
P3A, P type ATPase (809 aa)
     
0.634
Phatr15852
Predicted protein (138 aa)
       
  0.588
P5CS
Delta l-pyrroline-5-carboxylate synthetase (747 aa)
     
 
  0.539
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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