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STRINGSTRING
Phatr52561 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr52561" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr52561Predicted protein; Belongs to the MCM family (675 aa)    
Predicted Functional Partners:
Phatr9344
Predicted protein (389 aa)
     
 
  0.964
CDC6
Predicted protein (1107 aa)
   
 
  0.954
Phatr44146
DNA replication complex GINS protein SLD5; The GINS complex plays an essential role in the initiation of DNA replication (285 aa)
     
 
  0.944
Phatr45115
Predicted protein (1834 aa)
   
 
  0.943
Phatr32848
Predicted protein (685 aa)
     
 
  0.934
Phatr42750
Predicted protein (654 aa)
     
 
  0.916
MCM5
Predicted protein; Belongs to the MCM family (667 aa)
   
 
0.908
MCM3
Predicted protein; Belongs to the MCM family (551 aa)
   
 
0.906
MCM4
DNA helicase; Belongs to the MCM family (791 aa)
   
 
0.905
PCNA
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (260 aa)
     
 
  0.905
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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