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STRINGSTRING
Phatr52603 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr52603" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr52603Predicted protein (597 aa)    
Predicted Functional Partners:
Phatr54703
Udp-n-acetylglucosamine pyrophosphorylase (472 aa)
   
  0.968
PMI1
Mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 1 family (351 aa)
   
   
  0.900
Phatr37436
Predicted protein (431 aa)
 
   
  0.857
GFA1
Glutamine-fructose-6-phosphate transaminase (606 aa)
   
   
  0.798
UGP/PGM
UDP-Glucose-Pyrophosphorylase/Phosphoglucomutase (629 aa)
   
 
  0.783
PGM_1
Mutase phosphoglucomutase (600 aa)
   
 
  0.783
Phatr34146
60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family (199 aa)
     
   
  0.736
Phatr54493
Udp-n-acetylglucosamine diphosphorylase (600 aa)
   
 
  0.695
Phatr43626
Predicted protein (341 aa)
   
 
  0.695
Phatr23639
Precursor of phosphorylase udp-glucose diphosphorylase (712 aa)
   
 
  0.695
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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