STRINGSTRING
Phatr52619 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr52619" - Purine permease in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr52619Purine permease (593 aa)    
Predicted Functional Partners:
CPS-II
Predicted protein (1542 aa)
   
   
  0.803
Phatr24195
CPS III, carbamoyl-phosphate synthase mitochindrial (1463 aa)
   
   
  0.803
Phatr49522
5-hydroxyisourate hydrolase (299 aa)
 
     
  0.736
Phatr29736
Uricase (247 aa)
   
   
  0.638
Phatr25183
Predicted protein (334 aa)
   
   
  0.629
Phatr31718
Inosine-5’-monophosphate dehydrogenase (468 aa)
   
   
  0.562
Phatr27735
Predicted protein (538 aa)
   
   
  0.554
Phatr34898
Predicted protein (257 aa)
   
   
  0.548
Phatr26336
Predicted protein (179 aa)
   
   
  0.548
Phatr47067
Predicted protein (1237 aa)
   
   
  0.514
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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