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Phatr5311 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr5311" - Proteasome subunit beta type in Phaeodactylum tricornutum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurence
Coexpression
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[Homology]
Score
Phatr5311Proteasome subunit beta type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family (201 aa)    
Predicted Functional Partners:
Phatr28202
Proteasome subunit alpha type (245 aa)
   
 
  0.975
Phatr53939
Proteasome endopeptidase complex; Proteasome alpha 1 subunit; Belongs to the peptidase T1A family (245 aa)
   
 
  0.968
Phatr5685
Proteasome subunit alpha type (258 aa)
   
 
  0.958
Phatr24474
Proteasome subunit alpha type (264 aa)
   
 
  0.952
Phatr30003
Predicted protein (204 aa)
   
 
  0.945
Phatr28219
Predicted protein; Belongs to the AAA ATPase family (447 aa)
     
 
  0.940
Phatr30067
Predicted protein; Belongs to the AAA ATPase family (403 aa)
     
 
  0.939
Phatr9090
Predicted protein; Belongs to the AAA ATPase family (431 aa)
   
 
  0.935
RPN3
Regulatory proteasome non-atpase subunit 3 (323 aa)
     
 
  0.932
RPN8
Regulatory proteasome non-atpase subunit 8 (334 aa)
     
 
  0.931
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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