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STRINGSTRING
MK protein (Phaeodactylum tricornutum) - STRING interaction network
"MK" - Mevalonate kinase in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MKMevalonate kinase (490 aa)    
Predicted Functional Partners:
Phatr16870
3-hydroxy-3-methylglutaryl coenzyme A reductase (367 aa)
 
 
  0.994
MPDC
Diphosphomevalonate decarboxylase; Performs the first committed step in the biosynthesis of isoprenes (415 aa)
 
   
  0.992
Phatr16649
3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase (461 aa)
 
   
  0.963
Phatr12330
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (159 aa)
           
  0.951
DXR
1-deoxy-d-xylulose-5-phosphate reductoisomerase (402 aa)
         
  0.942
PHATR_645
Terpene cyclase/mutase family member; Acetyl-coenzyme A synthetase; Belongs to the terpene cyclase/mutase family (678 aa)
   
   
  0.930
Phatr49325
Predicted protein; Belongs to the FPP/GGPP synthase family (343 aa)
   
   
  0.923
CMK
4-diphosphocytidyl-2c-methyl-d-erythritol kinase (355 aa)
           
  0.923
HDS
Putative chloroplast 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (757 aa)
           
  0.922
Phatr23913
Acetyl-coa c-acetyltransferase; Belongs to the thiolase family (396 aa)
     
   
  0.914
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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