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Phatr53964 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr53964" - Probable calcium ATPase in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr53964Probable calcium ATPase (1006 aa)    
Predicted Functional Partners:
Phatr6387
Predicted protein (135 aa)
   
  0.863
ATPase2-1B
P1B, P type ATPase (827 aa)
     
0.635
ATPase5-1B
P1B, P type ATPase (754 aa)
     
0.635
ATPase1-1B
P1B, P type ATPase (883 aa)
     
0.635
Phatrdraft391
Predicted protein (749 aa)
     
0.635
Phatrdraft387
Predicted protein (749 aa)
     
0.635
Phatr676
P1B, P type ATPase (710 aa)
     
0.634
Phatr5651
14-3-3-like protein (241 aa)
       
 
  0.628
Phatr47992
Predicted protein (432 aa)
   
 
  0.626
Phatr51720
Fumarate reductase flavoprotein (668 aa)
   
 
  0.540
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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