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STRINGSTRING
GEL1 protein (Phaeodactylum tricornutum) - STRING interaction network
"GEL1" - Gelsolin in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GEL1Gelsolin (403 aa)    
Predicted Functional Partners:
ACT1
Actin/actin like proteinPredicted protein; Belongs to the actin family (377 aa)
     
 
  0.691
ARP1
Actin related protein; Belongs to the actin family (391 aa)
     
 
  0.691
Phatr29812
Actin/actin like proteinPredicted protein; Belongs to the actin family (377 aa)
     
 
  0.691
Act2
Actin/actin like protein; Actin; Belongs to the actin family (377 aa)
     
 
  0.691
Phatr46058
Formin like protein (2015 aa)
     
 
  0.624
Phatr45580
Coronin like protein; Belongs to the WD repeat coronin family (450 aa)
 
 
   
  0.458
Phatrdraft972
Ammonium_transporter (540 aa)
           
  0.456
Phatr1862
Ammonium transporter (431 aa)
           
  0.456
Phatr1813
Ammonium transporter (433 aa)
           
  0.456
Phatr11128
Ammonium transporter (441 aa)
           
  0.456
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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